Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953509.1_cds_XP_016492631.1_82820
CDS Infomation

[gene=LOC107812114] [db_xref=GeneID:107812114] [protein=cytokinin hydroxylase-like] [protein_id=XP_016492631.1] [location=complement(join(41566..41994,42250..42876,44346..44575,44992..45277))] [gbkey=CDS]
Sequence

ATGGAATTCGTCCAGTTTTCTCAAGTTCTTAGCTTGATAAGCATGGCTGCCATTCTTTTG
TTTATGCTAGGGAAAGTAATATATTCTTGTTGGATTTTGCCTAAGCTGAGGTATAGAAAG
CTTAGGACAAATGGATTTGACGGACCAGCTCCAATTTTCCCTCTTGGAAATATAAATGAC
ATGAAGAAGGAGTTGAAGAAGACAGTTTCTCCTTCTTTGAGCATTAGCAATCATGACATT
CATTCATTTGCATTCCCATACTATGCTCGGTGGCAGAAGTTGCATGGTAACGTATTTATC
TACTGGCTAGGAACAGAGCCATTTCTGTACATAGCAGATCCTGAATTTATAAAGAAGATG
TCAGCGGTTGTAATGGGCAAAAGTTGGGGAAAGCCAAGAGTATTTAAGAGGGATAGAGAC
CCCTTGTTTGGGAATGGCCTTGTTATGGTGGAAGGGGATAAGTGGGTTAATCACAGGCAT
GTTATTAATCCTGCTTTTTCCCCTGCCAGCTTGAAGGGTATGACAAACTTAATGGCGGAG
TCGGCCACAAATATGCTAGACCGGTGGGCGGACCTCATATACTCAGGGAAGAAAGAAATC
GAGATCGAAGTCGAAAAGGAAATCACAAGCACAGCGGGTGAAATCATTGCGAAAACAACC
TTTGGAATCAACTACGAAAACGGGGGGAAAGTGTTTGATAAATTAAGAACACTGCAAATC
GCTCTTTTCAAGTCCATACGTTTTGTTGGAGTACCATATGGGAACCTGATATATCATAAA
GAGGCGTTGAAAGCCAAGAAACTCGGGAAAGAGATTGACGCTCTCCTTGTGTCGATCATT
GAAGCTCGAAAAAAGATGGACAAAAATCAATATTCTCAACATGATCTTCTGAGTCTGTTA
ATGCTAGATGAGAGTGCTAATGGCATGGATTGCCGACTTGGAAAGACGTTAAGTACAAGG
GAATTGGTGGATGAGTGTAAGACGATTTTCATTGGAGGTCATGAGACCTCTGCCTTGGCA
CTCACCTGGACTATGTTGCTTCTGGCCTTGCATCCTGAATGGCAAACTCAGCTCAGAGAG
GAAATCAAACAAGTGTTTGGAGTAGGTGAAATTGATGTTACAAGGCTTAATGCTCTCAGA
AAGATGGGATGGGTGATGAACGAAGTGCTAAGACTATATTCACCAGCACCAAATGTACAG
AGACAAGCTAAAGATGATATTCAAGTGGACAATAATGTAGTCATTCCTAAAGGAACAAAT
ATATGGATTGATGTGGTGTCAATGCACCACGACAAGCAGCTTTGGGGTGAAGACGTTAAC
GAATTCAAACCAGAAAGGTTTAAAGATGACGTTTATGGTGGATGCAAACACAAAATGGGA
TTCTTGCCTTTTGGTTTTGGAGGAAGAATGTGCATTGGCAAGAATTTGTTTCTCATGGAG
TACAAGATTGTGTTGTCCTTAATCTTGACTAGGTTCTCTTTCTCCATCTCCCCAAACTAT
AAGCATTGCCCTTCTATCCTGCTTTCTCTTAGGCCCACACATGGATTGCCTCTTATAATC
CGACCCCTTTAA

Peptide Sequence

PEP ID

XP_016492631.1
PEP Infomation

PREDICTED: cytokinin hydroxylase-like [Nicotiana tabacum]
Sequence

MEFVQFSQVLSLISMAAILLFMLGKVIYSCWILPKLRYRKLRTNGFDGPAPIFPLGNIND
MKKELKKTVSPSLSISNHDIHSFAFPYYARWQKLHGNVFIYWLGTEPFLYIADPEFIKKM
SAVVMGKSWGKPRVFKRDRDPLFGNGLVMVEGDKWVNHRHVINPAFSPASLKGMTNLMAE
SATNMLDRWADLIYSGKKEIEIEVEKEITSTAGEIIAKTTFGINYENGGKVFDKLRTLQI
ALFKSIRFVGVPYGNLIYHKEALKAKKLGKEIDALLVSIIEARKKMDKNQYSQHDLLSLL
MLDESANGMDCRLGKTLSTRELVDECKTIFIGGHETSALALTWTMLLLALHPEWQTQLRE
EIKQVFGVGEIDVTRLNALRKMGWVMNEVLRLYSPAPNVQRQAKDDIQVDNNVVIPKGTN
IWIDVVSMHHDKQLWGEDVNEFKPERFKDDVYGGCKHKMGFLPFGFGGRMCIGKNLFLME
YKIVLSLILTRFSFSISPNYKHCPSILLSLRPTHGLPLIIRPL

Transcript Sequence

Gene sequence data has not been registered.